Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm22594-201ENSMUST00000104251 130 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm24074-201ENSMUST00000158178 260 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm37723-201ENSMUST00000194480 565 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm7902-201ENSMUST00000198842 947 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm5302-201ENSMUST00000202130 796 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm45085-201ENSMUST00000209100 441 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm9791-201ENSMUST00000060997 447 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm16288-201ENSMUST00000137940 367 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6439-201ENSMUST00000199849 862 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Gm26782-203ENSMUST00000227103 751 ntBASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Sh3rf2Q8BZT2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms