Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Nln-205ENSMUST00000224945 2486 ntBASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smco3Q8BQM7 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm5187-201ENSMUST00000117317 991 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm11222-201ENSMUST00000119005 738 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm27572-201ENSMUST00000183702 255 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm8862-201ENSMUST00000198379 1346 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.96□□□□□ -0.98
Smco3Q8BQM7 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smco3Q8BQM7 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm11424-201ENSMUST00000121929 829 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Mir1982-201ENSMUST00000157368 74 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm22846-201ENSMUST00000157706 270 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm2991-201ENSMUST00000173338 480 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm27627-201ENSMUST00000183644 150 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm18935-201ENSMUST00000212692 664 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 CT572985.1-201ENSMUST00000220599 4714 ntBASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smco3Q8BQM7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms