Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm12783-201ENSMUST00000121425 397 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm9372-201ENSMUST00000168454 430 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm19927-201ENSMUST00000185792 781 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm29013-201ENSMUST00000187431 237 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm43912-201ENSMUST00000204352 538 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm44647-201ENSMUST00000207402 428 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh19Q80TF3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.81□□□□□ -0.68
Pcdh19Q80TF3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh19Q80TF3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms