Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm12464-201ENSMUST00000121385 1016 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm6939-201ENSMUST00000122029 864 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm16574-201ENSMUST00000159301 745 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Platr10-202ENSMUST00000191479 818 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm37012-201ENSMUST00000194991 1078 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm45795-201ENSMUST00000211847 400 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 AC132881.1-201ENSMUST00000223780 1062 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 CT030035.1-201ENSMUST00000223964 935 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm10020-201ENSMUST00000081993 612 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm10689-201ENSMUST00000098864 432 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Btrc-209ENSMUST00000224478 2194 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm22669-201ENSMUST00000158723 318 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm4960-201ENSMUST00000182928 1001 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm2328-201ENSMUST00000193525 535 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm45745-201ENSMUST00000211447 1180 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm42833-201ENSMUST00000196019 2124 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm10305-201ENSMUST00000195331 2475 ntBASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC8.35□□□□□ -1.07
NipblQ6KCD5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm7790-201ENSMUST00000118716 1310 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms