Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Gli3Q61602 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Gm6967-201ENSMUST00000182599 1007 ntBASIC14.36□□□□□ -0.11
Gli3Q61602 Gm17828-201ENSMUST00000183380 799 ntBASIC14.36□□□□□ -0.11
Gli3Q61602 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gli3Q61602 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Gm44629-201ENSMUST00000206951 1840 ntBASIC14.36□□□□□ -0.11
Gli3Q61602 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC14.35□□□□□ -0.11
Gli3Q61602 Gm11225-201ENSMUST00000118903 1049 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Gm13864-201ENSMUST00000119745 785 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Gm25687-201ENSMUST00000175442 241 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Gm7516-201ENSMUST00000186198 706 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gli3Q61602 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC14.35□□□□□ -0.11
Gli3Q61602 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Gli3Q61602 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Gli3Q61602 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.35□□□□□ -0.11
Gli3Q61602 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gli3Q61602 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.35□□□□□ -0.11
Gli3Q61602 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gli3Q61602 Gm13197-201ENSMUST00000117204 225 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm11401-201ENSMUST00000117212 344 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm6500-201ENSMUST00000119412 451 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm14138-201ENSMUST00000122061 745 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC14.34□□□□□ -0.11
Gli3Q61602 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC14.34□□□□□ -0.11
Gli3Q61602 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm2324-201ENSMUST00000187464 662 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm29372-201ENSMUST00000191416 364 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm17815-201ENSMUST00000198305 895 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.34□□□□□ -0.11
Gli3Q61602 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.34□□□□□ -0.11
Gli3Q61602 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gli3Q61602 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC14.34□□□□□ -0.11
Gli3Q61602 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gli3Q61602 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gli3Q61602 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC14.34□□□□□ -0.11
Gli3Q61602 Catspere1-201ENSMUST00000194528 2949 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms