Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm23699-201ENSMUST00000158835 135 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Mir3102-201ENSMUST00000175555 104 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm5714-201ENSMUST00000197343 566 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rnf149Q3U2C5 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm42997-202ENSMUST00000200321 985 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Ginm1-202ENSMUST00000065124 300 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm4978-201ENSMUST00000071565 801 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rnf149Q3U2C5 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Gm15617-201ENSMUST00000118973 771 ntBASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rnf149Q3U2C5 Gm10051-201ENSMUST00000145209 414 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms