Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim43aQ3TL54 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trim43aQ3TL54 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim43aQ3TL54 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim43aQ3TL54 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm14263-201ENSMUST00000117955 746 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm15264-201ENSMUST00000118050 502 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm15566-201ENSMUST00000121130 590 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm11244-201ENSMUST00000121243 237 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm7255-201ENSMUST00000187371 908 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim43aQ3TL54 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm13611-201ENSMUST00000118269 318 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12616-201ENSMUST00000118594 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm13408-201ENSMUST00000119822 798 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm13935-201ENSMUST00000121859 798 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm9550-201ENSMUST00000161130 862 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12624-201ENSMUST00000177615 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12621-201ENSMUST00000177760 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12615-201ENSMUST00000177970 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12622-201ENSMUST00000177975 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12627-201ENSMUST00000178412 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12625-201ENSMUST00000179122 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12614-201ENSMUST00000179586 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm12613-201ENSMUST00000180323 382 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm5733-201ENSMUST00000190232 939 ntBASIC11.57□□□□□ -0.56
Trim43aQ3TL54 Gm43947-201ENSMUST00000203019 959 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms