Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.16□□□□□ -0.78
Cacna1aP97445 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.16□□□□□ -0.78
Cacna1aP97445 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Btrc-209ENSMUST00000224478 2194 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm28671-201ENSMUST00000187036 692 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cacna1aP97445 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cacna1aP97445 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cacna1aP97445 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm40332-201ENSMUST00000199847 938 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm42867-201ENSMUST00000202995 469 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.15□□□□□ -0.78
Cacna1aP97445 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm10254-201ENSMUST00000052888 867 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.15□□□□□ -0.78
Cacna1aP97445 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.15□□□□□ -0.78
Cacna1aP97445 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Cacna1aP97445 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cacna1aP97445 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cacna1aP97445 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Cacna1aP97445 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.79
Cacna1aP97445 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Gm44498-201ENSMUST00000199509 111 ntBASIC10.15□□□□□ -0.79
Cacna1aP97445 Gm42599-201ENSMUST00000201308 469 ntBASIC10.15□□□□□ -0.79
Cacna1aP97445 Gm6794-201ENSMUST00000203829 457 ntBASIC10.15□□□□□ -0.79
Cacna1aP97445 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.15□□□□□ -0.79
Cacna1aP97445 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cacna1aP97445 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.79
Cacna1aP97445 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cacna1aP97445 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.14□□□□□ -0.79
Cacna1aP97445 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cacna1aP97445 Gm22495-201ENSMUST00000104492 126 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms