Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.35□□□□□ -0.75
Nup43P59235 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup43P59235 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Gm14807-201ENSMUST00000116640 983 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Gm9673-201ENSMUST00000119287 781 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Gm12791-201ENSMUST00000120788 655 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Gm12030-201ENSMUST00000121917 223 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.35□□□□□ -0.75
Nup43P59235 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.35□□□□□ -0.75
Nup43P59235 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.35□□□□□ -0.75
Nup43P59235 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.35□□□□□ -0.75
Nup43P59235 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Gm22379-201ENSMUST00000157480 131 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm19927-201ENSMUST00000185792 781 ntBASIC10.35□□□□□ -0.75
Nup43P59235 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup43P59235 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup43P59235 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup43P59235 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.35□□□□□ -0.75
Nup43P59235 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup43P59235 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup43P59235 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup43P59235 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup43P59235 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm8502-201ENSMUST00000185708 901 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Gm21147-201ENSMUST00000186046 913 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm7255-201ENSMUST00000187371 908 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm8510-201ENSMUST00000189202 895 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm2316-201ENSMUST00000190613 921 ntBASIC10.34□□□□□ -0.75
Nup43P59235 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup43P59235 Gm43671-201ENSMUST00000200422 433 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm43452-201ENSMUST00000201873 991 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.34□□□□□ -0.75
Nup43P59235 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.34□□□□□ -0.75
Nup43P59235 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.34□□□□□ -0.75
Nup43P59235 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms