Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 BC043934-202ENSMUST00000185694 2356 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pdx1P52946 Mir453-201ENSMUST00000104732 82 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.8□□□□□ -0.68
Pdx1P52946 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm16030-201ENSMUST00000159098 603 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm40414-201ENSMUST00000197608 481 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.8□□□□□ -0.68
Pdx1P52946 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm16380-201ENSMUST00000077997 478 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Pdx1P52946 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.8□□□□□ -0.68
Pdx1P52946 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdx1P52946 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.8□□□□□ -0.68
Pdx1P52946 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdx1P52946 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm11380-201ENSMUST00000118067 560 ntBASIC10.79□□□□□ -0.68
Pdx1P52946 Gm11573-201ENSMUST00000119956 394 ntBASIC10.79□□□□□ -0.68
Pdx1P52946 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdx1P52946 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.79□□□□□ -0.68
Pdx1P52946 Gm6677-201ENSMUST00000195100 441 ntBASIC10.79□□□□□ -0.68
Pdx1P52946 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.79□□□□□ -0.68
Pdx1P52946 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.79□□□□□ -0.68
Pdx1P52946 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.79□□□□□ -0.68
Pdx1P52946 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms