Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
GdnfP48540 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC9.68□□□□□ -0.86
GdnfP48540 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Gm14058-201ENSMUST00000116082 735 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm13461-201ENSMUST00000120980 662 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm11450-201ENSMUST00000121144 333 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Mir1896-201ENSMUST00000122641 81 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.68□□□□□ -0.86
GdnfP48540 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC9.68□□□□□ -0.86
GdnfP48540 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Gm18734-201ENSMUST00000172937 808 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Gm29011-201ENSMUST00000191059 712 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm37073-201ENSMUST00000192469 1222 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Gm5982-201ENSMUST00000196234 512 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm5714-201ENSMUST00000197343 566 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
GdnfP48540 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Gm6867-201ENSMUST00000219165 425 ntBASIC9.68□□□□□ -0.86
GdnfP48540 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm10288-201ENSMUST00000084614 537 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.68□□□□□ -0.86
GdnfP48540 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.68□□□□□ -0.86
GdnfP48540 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
GdnfP48540 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
GdnfP48540 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.67□□□□□ -0.86
GdnfP48540 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
GdnfP48540 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
GdnfP48540 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
GdnfP48540 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
GdnfP48540 Gm13035-201ENSMUST00000117496 342 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Gm12579-201ENSMUST00000118040 783 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.67□□□□□ -0.86
GdnfP48540 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
GdnfP48540 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Gm2965-201ENSMUST00000198365 343 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Gm7439-201ENSMUST00000214053 835 ntBASIC9.67□□□□□ -0.86
GdnfP48540 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
GdnfP48540 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
GdnfP48540 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms