Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm45110-201ENSMUST00000205704 1402 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm23062-201ENSMUST00000102349 110 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm15132-201ENSMUST00000118581 652 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm17797-201ENSMUST00000182175 997 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm18443-201ENSMUST00000185358 556 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm3945-201ENSMUST00000196637 683 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm44173-201ENSMUST00000204316 132 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm18391-201ENSMUST00000217189 658 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Gm5194-201ENSMUST00000221457 742 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.25□□□□□ -0.61
Cxcl12P40224 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cxcl12P40224 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cxcl12P40224 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl12P40224 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.24□□□□□ -0.61
Cxcl12P40224 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm23479-201ENSMUST00000158876 122 ntBASIC11.24□□□□□ -0.61
Cxcl12P40224 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm18182-201ENSMUST00000191380 1251 ntBASIC11.24□□□□□ -0.61
Cxcl12P40224 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC11.24□□□□□ -0.61
Cxcl12P40224 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.24□□□□□ -0.61
Cxcl12P40224 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.24□□□□□ -0.61
Cxcl12P40224 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.24□□□□□ -0.61
Cxcl12P40224 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.24□□□□□ -0.61
Cxcl12P40224 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cxcl12P40224 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms