Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PtprkP35822 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC17.12■□□□□ 0.33
PtprkP35822 Gm37141-201ENSMUST00000191938 422 ntBASIC17.12■□□□□ 0.33
PtprkP35822 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC17.12■□□□□ 0.33
PtprkP35822 Gm37819-201ENSMUST00000194626 1065 ntBASIC17.12■□□□□ 0.33
PtprkP35822 Gm9771-201ENSMUST00000198267 1137 ntBASIC17.12■□□□□ 0.33
PtprkP35822 AC161374.2-201ENSMUST00000223662 596 ntBASIC17.12■□□□□ 0.33
PtprkP35822 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PtprkP35822 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC17.11■□□□□ 0.33
PtprkP35822 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PtprkP35822 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC17.11■□□□□ 0.33
PtprkP35822 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PtprkP35822 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PtprkP35822 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC17.11■□□□□ 0.33
PtprkP35822 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC17.11■□□□□ 0.33
PtprkP35822 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC17.11■□□□□ 0.33
PtprkP35822 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC17.11■□□□□ 0.33
PtprkP35822 Gm23899-201ENSMUST00000158112 90 ntBASIC17.11■□□□□ 0.33
PtprkP35822 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Mir8104-201ENSMUST00000185165 101 ntBASIC17.11■□□□□ 0.33
PtprkP35822 Gm19566-201ENSMUST00000199576 610 ntBASIC17.11■□□□□ 0.33
PtprkP35822 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Zfp389-202ENSMUST00000224437 1234 ntBASIC17.11■□□□□ 0.33
PtprkP35822 AC242269.1-201ENSMUST00000227020 741 ntBASIC17.11■□□□□ 0.33
PtprkP35822 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Gm6378-201ENSMUST00000084199 444 ntBASIC17.11■□□□□ 0.33
PtprkP35822 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PtprkP35822 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Gm45170-201ENSMUST00000206746 1671 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm45110-201ENSMUST00000205704 1402 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC17.1■□□□□ 0.33
PtprkP35822 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Gm23908-201ENSMUST00000104599 132 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm7672-201ENSMUST00000180915 872 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC17.1■□□□□ 0.33
PtprkP35822 Gm29487-201ENSMUST00000190146 256 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm2021-201ENSMUST00000190623 464 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm8022-201ENSMUST00000191763 904 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Ighv1-8-201ENSMUST00000192236 293 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm42821-201ENSMUST00000199771 489 ntBASIC17.1■□□□□ 0.33
PtprkP35822 CR974487.1-201ENSMUST00000220984 413 ntBASIC17.1■□□□□ 0.33
PtprkP35822 AC132881.1-201ENSMUST00000223780 1062 ntBASIC17.1■□□□□ 0.33
PtprkP35822 AC130217.1-201ENSMUST00000224146 909 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PtprkP35822 Gm46339-201ENSMUST00000222720 3539 ntBASIC17.1■□□□□ 0.33
PtprkP35822 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PtprkP35822 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PtprkP35822 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PtprkP35822 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC17.09■□□□□ 0.33
PtprkP35822 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Gm12570-201ENSMUST00000122047 1030 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Gm3355-201ENSMUST00000160079 487 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PtprkP35822 Gm28916-201ENSMUST00000186988 699 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PtprkP35822 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Zkscan7-205ENSMUST00000216462 990 ntBASIC17.09■□□□□ 0.33
PtprkP35822 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC17.09■□□□□ 0.33
PtprkP35822 Gm3379-201ENSMUST00000222259 642 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Gm44975-201ENSMUST00000207435 1390 ntBASIC17.09■□□□□ 0.33
PtprkP35822 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC17.09■□□□□ 0.33
PtprkP35822 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PtprkP35822 Gm6727-201ENSMUST00000204102 1518 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms