Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nedd8P29595 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm9797-202ENSMUST00000218003 294 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nedd8P29595 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nedd8P29595 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nedd8P29595 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nedd8P29595 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC9.98□□□□□ -0.81
Nedd8P29595 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nedd8P29595 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm15920-201ENSMUST00000118998 402 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.98□□□□□ -0.81
Nedd8P29595 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm5070-201ENSMUST00000177599 862 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.98□□□□□ -0.81
Nedd8P29595 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Nedd8P29595 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nedd8P29595 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nedd8P29595 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms