Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Vcam1P29533 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vcam1P29533 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vcam1P29533 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Gm26208-201ENSMUST00000158677 124 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm6612-201ENSMUST00000170777 395 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Gm7627-201ENSMUST00000183205 999 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm42803-201ENSMUST00000201051 451 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.54□□□□□ -0.4
Vcam1P29533 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Vcam1P29533 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.54□□□□□ -0.4
Vcam1P29533 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.54□□□□□ -0.4
Vcam1P29533 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcam1P29533 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.54□□□□□ -0.4
Vcam1P29533 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Gm16209-201ENSMUST00000118457 627 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vcam1P29533 Gm10171-201ENSMUST00000126220 628 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 Gm23675-201ENSMUST00000157311 125 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vcam1P29533 Gm27833-201ENSMUST00000184285 124 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm28746-201ENSMUST00000187453 380 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm38349-201ENSMUST00000195732 462 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm42710-201ENSMUST00000200608 985 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Gm42689-201ENSMUST00000202403 404 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gm10233-201ENSMUST00000089275 628 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Rgr-203ENSMUST00000225070 4704 ntBASIC12.53□□□□□ -0.4
Vcam1P29533 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms