Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Pde6aP27664 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.66□□□□□ -0.38
Pde6aP27664 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pde6aP27664 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm14165-201ENSMUST00000121456 952 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Gm13445-201ENSMUST00000121664 307 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Mir1896-201ENSMUST00000122641 81 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Gm18014-201ENSMUST00000183369 817 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.66□□□□□ -0.38
Pde6aP27664 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pde6aP27664 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pde6aP27664 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pde6aP27664 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6aP27664 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6aP27664 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.66□□□□□ -0.38
Pde6aP27664 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Pde6aP27664 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pde6aP27664 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.65□□□□□ -0.38
Pde6aP27664 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pde6aP27664 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6aP27664 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms