Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm9162-201ENSMUST00000182081 991 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm5621-201ENSMUST00000187303 640 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.29□□□□□ -0.6
Nfkb1P25799 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.29□□□□□ -0.6
Nfkb1P25799 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.29□□□□□ -0.6
Nfkb1P25799 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nfkb1P25799 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.28□□□□□ -0.6
Nfkb1P25799 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nfkb1P25799 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm23612-201ENSMUST00000103823 110 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm14592-201ENSMUST00000117201 560 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm15196-201ENSMUST00000121406 482 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm23576-201ENSMUST00000179918 110 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm37319-201ENSMUST00000193500 636 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm5870-201ENSMUST00000196461 282 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm7880-201ENSMUST00000203748 871 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm43969-201ENSMUST00000204833 535 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm18204-201ENSMUST00000209835 793 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.28□□□□□ -0.6
Nfkb1P25799 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nfkb1P25799 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nfkb1P25799 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.27□□□□□ -0.6
Nfkb1P25799 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nfkb1P25799 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nfkb1P25799 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Nfkb1P25799 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nfkb1P25799 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms