Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Gm12176-201ENSMUST00000121420 875 ntBASIC9.73□□□□□ -0.85
P20040 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.73□□□□□ -0.85
P20040 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.73□□□□□ -0.85
P20040 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.73□□□□□ -0.85
P20040 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Mir8115-201ENSMUST00000184992 119 ntBASIC9.73□□□□□ -0.85
P20040 Gm3551-201ENSMUST00000190750 664 ntBASIC9.73□□□□□ -0.85
P20040 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.73□□□□□ -0.85
P20040 Gm5051-201ENSMUST00000204085 485 ntBASIC9.73□□□□□ -0.85
P20040 Gm44126-201ENSMUST00000204831 514 ntBASIC9.73□□□□□ -0.85
P20040 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.73□□□□□ -0.85
P20040 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.73□□□□□ -0.85
P20040 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.73□□□□□ -0.85
P20040 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
P20040 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
P20040 Olfr584-201ENSMUST00000098210 964 ntBASIC9.73□□□□□ -0.85
P20040 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
P20040 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.73□□□□□ -0.85
P20040 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.73□□□□□ -0.85
P20040 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
P20040 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.73□□□□□ -0.85
P20040 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P20040 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.72□□□□□ -0.85
P20040 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
P20040 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.72□□□□□ -0.85
P20040 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P20040 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
P20040 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.72□□□□□ -0.85
P20040 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P20040 Gm14071-201ENSMUST00000117817 509 ntBASIC9.72□□□□□ -0.85
P20040 Gm11244-201ENSMUST00000121243 237 ntBASIC9.72□□□□□ -0.85
P20040 Gm14460-201ENSMUST00000121511 639 ntBASIC9.72□□□□□ -0.85
P20040 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.72□□□□□ -0.85
P20040 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.72□□□□□ -0.85
P20040 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P20040 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.72□□□□□ -0.85
P20040 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.72□□□□□ -0.85
P20040 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.72□□□□□ -0.85
P20040 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.72□□□□□ -0.85
P20040 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.72□□□□□ -0.85
P20040 Gm7504-201ENSMUST00000201449 424 ntBASIC9.72□□□□□ -0.85
P20040 Gm44980-201ENSMUST00000205826 314 ntBASIC9.72□□□□□ -0.85
P20040 Gm9463-201ENSMUST00000206707 601 ntBASIC9.72□□□□□ -0.85
P20040 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.72□□□□□ -0.85
P20040 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.72□□□□□ -0.85
P20040 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.72□□□□□ -0.85
P20040 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms