Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm5738-201ENSMUST00000206016 779 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm18466-201ENSMUST00000209147 499 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hoxc9P09633 AC124581.2-201ENSMUST00000225459 282 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 AC154197.1-201ENSMUST00000225136 1382 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Snora68-201ENSMUST00000104375 131 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Gm8557-201ENSMUST00000220777 475 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Gm7242-201ENSMUST00000221134 705 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC14.1□□□□□ -0.15
Hoxc9P09633 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc9P09633 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc9P09633 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Klf10-203ENSMUST00000227920 2144 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm14231-201ENSMUST00000120090 592 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm15815-201ENSMUST00000120569 255 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm26174-201ENSMUST00000158415 219 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm8525-201ENSMUST00000189674 861 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm8226-201ENSMUST00000190511 798 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm37851-201ENSMUST00000193871 889 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm42617-201ENSMUST00000197640 1229 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm9515-201ENSMUST00000200276 647 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm5311-201ENSMUST00000203518 709 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 AC154477.1-201ENSMUST00000226515 773 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 AC103672.1-201ENSMUST00000227502 365 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 AC137842.2-201ENSMUST00000227734 797 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms