Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Hoxa3P02831 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Hoxa3P02831 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.22□□□□□ -0.93
Hoxa3P02831 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Hoxa3P02831 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.21□□□□□ -0.93
Hoxa3P02831 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.21□□□□□ -0.93
Hoxa3P02831 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.21□□□□□ -0.93
Hoxa3P02831 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Hoxa3P02831 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm25053-201ENSMUST00000103982 133 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm25922-201ENSMUST00000104281 130 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm11340-201ENSMUST00000119226 412 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm24679-201ENSMUST00000158762 111 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm16030-201ENSMUST00000159098 603 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm25053-202ENSMUST00000199731 132 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm43671-201ENSMUST00000200422 433 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.21□□□□□ -0.94
Hoxa3P02831 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Id2-203ENSMUST00000222667 958 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Hoxa3P02831 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Hoxa3P02831 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.21□□□□□ -0.94
Hoxa3P02831 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Hoxa3P02831 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Snord17-201ENSMUST00000104526 238 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Hoxa3P02831 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms