Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.26□□□□□ -0.29
NpcdF8VQB8 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.26□□□□□ -0.29
NpcdF8VQB8 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Mir598-201ENSMUST00000102094 79 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 BB187690-201ENSMUST00000198619 1176 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm42859-201ENSMUST00000199572 193 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm40332-201ENSMUST00000199847 938 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Gm44917-201ENSMUST00000208798 520 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Krtap6-3-201ENSMUST00000079151 444 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.25□□□□□ -0.29
NpcdF8VQB8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NpcdF8VQB8 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm14176-201ENSMUST00000121302 477 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm5873-201ENSMUST00000177157 1066 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.24□□□□□ -0.29
NpcdF8VQB8 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NpcdF8VQB8 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NpcdF8VQB8 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms