Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
TprF6ZDS4 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
TprF6ZDS4 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm7565-201ENSMUST00000203611 623 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
TprF6ZDS4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.13□□□□□ -0.79
TprF6ZDS4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
TprF6ZDS4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
TprF6ZDS4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm25148-201ENSMUST00000104611 123 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC10.12□□□□□ -0.79
TprF6ZDS4 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm38314-201ENSMUST00000195709 625 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm42908-201ENSMUST00000197508 870 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm7242-201ENSMUST00000221134 705 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm14021-201ENSMUST00000117683 961 ntBASIC10.12□□□□□ -0.79
TprF6ZDS4 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TprF6ZDS4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.12□□□□□ -0.79
TprF6ZDS4 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.11□□□□□ -0.79
TprF6ZDS4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
TprF6ZDS4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.11□□□□□ -0.79
TprF6ZDS4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.11□□□□□ -0.79
TprF6ZDS4 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC10.11□□□□□ -0.79
TprF6ZDS4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TprF6ZDS4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms