Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Gm29543-201ENSMUST00000188138 967 ntBASIC12.66□□□□□ -0.38
Clrn2B2RVW2 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Gm18555-201ENSMUST00000197935 584 ntBASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm14006-201ENSMUST00000122132 981 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm8643-201ENSMUST00000195228 625 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clrn2B2RVW2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Clrn2B2RVW2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clrn2B2RVW2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clrn2B2RVW2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clrn2B2RVW2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm15815-201ENSMUST00000120569 255 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm43811-201ENSMUST00000202862 695 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn2B2RVW2 Gm8162-201ENSMUST00000213951 665 ntBASIC12.64□□□□□ -0.39
Clrn2B2RVW2 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms