Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm11667-201ENSMUST00000119828 486 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm21092-201ENSMUST00000178995 955 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Mir7051-201ENSMUST00000184167 73 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm7467-201ENSMUST00000185173 652 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm37299-201ENSMUST00000193951 826 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm44980-201ENSMUST00000205826 314 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm9463-201ENSMUST00000206707 601 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm23105-201ENSMUST00000083719 134 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.9□□□□□ -0.83
Sec61a2Q9JLR1 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm11246-201ENSMUST00000120880 345 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm8737-201ENSMUST00000122208 642 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Mir3547-201ENSMUST00000175461 88 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm23771-201ENSMUST00000178702 110 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm27910-201ENSMUST00000185004 107 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm37458-201ENSMUST00000194055 410 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm43520-201ENSMUST00000197996 164 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm5468-202ENSMUST00000227851 682 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.89□□□□□ -0.83
Sec61a2Q9JLR1 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms