Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm18014-201ENSMUST00000183369 817 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm2594-201ENSMUST00000214774 742 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Capsl-202ENSMUST00000226688 739 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk3aQ9JKX8 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm25072-201ENSMUST00000175233 235 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Mir3547-201ENSMUST00000175461 88 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm9135-201ENSMUST00000182963 990 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Gm5805-201ENSMUST00000072779 456 ntBASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.51□□□□□ -0.73
Upk3aQ9JKX8 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms