Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm12337-201ENSMUST00000119634 400 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm25554-201ENSMUST00000158075 113 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Mir5132-201ENSMUST00000175166 71 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Nln-205ENSMUST00000224945 2486 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.37□□□□□ -0.59
Cpne8Q9DC53 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm28388-201ENSMUST00000186262 437 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm43378-201ENSMUST00000199336 582 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm42859-201ENSMUST00000199572 193 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm43380-201ENSMUST00000200421 220 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cpne8Q9DC53 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpne8Q9DC53 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms