Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.4□□□□□ -0.75
Nkx6-1Q99MA9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm24140-201ENSMUST00000122773 326 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm5526-201ENSMUST00000153604 423 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm17944-201ENSMUST00000186351 643 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm8226-201ENSMUST00000190511 798 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm44605-201ENSMUST00000206892 949 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-1Q99MA9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms