Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm16219-201ENSMUST00000120096 274 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Mir432-201ENSMUST00000157230 75 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm27956-201ENSMUST00000175604 260 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm18010-201ENSMUST00000203553 202 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm18035-201ENSMUST00000211962 589 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 AC121357.1-201ENSMUST00000227365 608 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.67□□□□□ -0.86
Scrt1Q99M85 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Scrt1Q99M85 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm15136-201ENSMUST00000120552 533 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 BC080696-201ENSMUST00000202858 1218 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm7192-201ENSMUST00000210793 1137 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 AC154759.1-201ENSMUST00000224137 1159 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 AC164099.1-201ENSMUST00000227780 333 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms