Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Clp1Q99LI9 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm38038-201ENSMUST00000193803 259 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm43097-201ENSMUST00000196867 151 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.63□□□□□ -0.55
Clp1Q99LI9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clp1Q99LI9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm23132-201ENSMUST00000104254 132 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm13688-201ENSMUST00000121557 608 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm42859-201ENSMUST00000199572 193 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm45310-201ENSMUST00000210436 275 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.62□□□□□ -0.55
Clp1Q99LI9 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clp1Q99LI9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clp1Q99LI9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms