Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm23105-201ENSMUST00000083719 134 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usp11Q99K46 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.56□□□□□ -0.56
Usp11Q99K46 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp11Q99K46 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm16071-201ENSMUST00000119589 793 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm14942-201ENSMUST00000119642 336 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm6485-201ENSMUST00000160676 439 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm23771-201ENSMUST00000178702 110 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm10731-201ENSMUST00000181171 448 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm17826-201ENSMUST00000189720 798 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.55□□□□□ -0.56
Usp11Q99K46 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Usp11Q99K46 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Usp11Q99K46 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm12029-201ENSMUST00000120073 832 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm16219-201ENSMUST00000120096 274 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm27910-201ENSMUST00000185004 107 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm9463-201ENSMUST00000206707 601 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.54□□□□□ -0.56
Usp11Q99K46 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Usp11Q99K46 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Usp11Q99K46 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms