Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm44907-201ENSMUST00000207423 1633 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm12857-201ENSMUST00000117678 592 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm16007-201ENSMUST00000117837 286 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm13600-201ENSMUST00000117949 744 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm12225-201ENSMUST00000117995 298 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm14724-201ENSMUST00000118400 537 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm12217-201ENSMUST00000118858 696 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm9392-201ENSMUST00000119337 554 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm12196-201ENSMUST00000120954 262 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm4310-201ENSMUST00000177847 889 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm37491-201ENSMUST00000192552 1111 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm44946-201ENSMUST00000208425 572 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm2553-201ENSMUST00000215986 605 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 AC211878.6-201ENSMUST00000221896 358 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 AL590614.1-201ENSMUST00000226037 268 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdhb17Q91VD8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm27013-202ENSMUST00000205067 1436 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm13423-201ENSMUST00000117205 888 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm8566-201ENSMUST00000120174 465 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Defa-ps13-201ENSMUST00000120695 204 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm25271-201ENSMUST00000157273 290 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm25732-201ENSMUST00000175168 60 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm26590-201ENSMUST00000180857 1277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 Gm27530-201ENSMUST00000184096 98 ntBASIC12.3□□□□□ -0.44
Pcdhb17Q91VD8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms