Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tram1Q91V04 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm14592-201ENSMUST00000117201 560 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm7255-201ENSMUST00000187371 908 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm45310-201ENSMUST00000210436 275 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm7653-201ENSMUST00000214567 508 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.38□□□□□ -0.91
Tram1Q91V04 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tram1Q91V04 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm5187-201ENSMUST00000117317 991 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Olfr284-202ENSMUST00000206647 966 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm5996-201ENSMUST00000211110 718 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm21769-201ENSMUST00000211922 111 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm19208-201ENSMUST00000213861 912 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.37□□□□□ -0.91
Tram1Q91V04 Gm6867-201ENSMUST00000219165 425 ntBASIC9.37□□□□□ -0.91
Tram1Q91V04 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tram1Q91V04 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tram1Q91V04 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms