Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm26083-201ENSMUST00000157904 193 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm45331-201ENSMUST00000209868 554 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr582-201ENSMUST00000098212 960 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ccdc28aQ8CEI3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Platr10-202ENSMUST00000191479 818 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 AU022133-201ENSMUST00000200601 873 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm18212-201ENSMUST00000211678 889 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm9899-201ENSMUST00000065519 555 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ccdc28aQ8CEI3 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Gm18367-201ENSMUST00000176139 600 ntBASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Gm18042-201ENSMUST00000219887 790 ntBASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc28aQ8CEI3 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms