Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccdc28bQ8CEG5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm11941-201ENSMUST00000119904 610 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm25661-201ENSMUST00000157704 296 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 AY702102-202ENSMUST00000194651 1173 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm2965-201ENSMUST00000198365 343 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm42859-201ENSMUST00000199572 193 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm18062-201ENSMUST00000208020 547 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm18055-201ENSMUST00000208254 547 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccdc28bQ8CEG5 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm12742-201ENSMUST00000117326 410 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm24990-201ENSMUST00000157406 323 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm26361-201ENSMUST00000158868 186 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm44967-201ENSMUST00000207047 631 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm8342-201ENSMUST00000209839 757 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm5996-201ENSMUST00000211110 718 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm7399-201ENSMUST00000032395 858 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm10478-201ENSMUST00000084451 396 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm4810-201ENSMUST00000177721 1607 ntBASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccdc28bQ8CEG5 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms