Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc17Q8CE13 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc17Q8CE13 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc17Q8CE13 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc17Q8CE13 Rgr-203ENSMUST00000225070 4704 ntBASIC11.48□□□□□ -0.57
Ccdc17Q8CE13 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm13039-201ENSMUST00000118638 794 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm8302-201ENSMUST00000119217 852 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm9372-201ENSMUST00000168454 430 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm29067-201ENSMUST00000190821 470 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm6606-201ENSMUST00000193613 947 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm4903-201ENSMUST00000210462 405 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Gm6478-201ENSMUST00000099450 742 ntBASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc17Q8CE13 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm23612-201ENSMUST00000103823 110 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm15374-201ENSMUST00000119313 844 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm15982-201ENSMUST00000121681 554 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm23576-201ENSMUST00000179918 110 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm11942-201ENSMUST00000180255 345 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm31274-201ENSMUST00000197356 229 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc17Q8CE13 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms