Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nhlrc3Q8CCH2 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm22920-201ENSMUST00000102175 109 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm23061-201ENSMUST00000102348 116 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm15528-201ENSMUST00000117821 864 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm14017-201ENSMUST00000121934 386 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm24992-201ENSMUST00000157412 130 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm25226-201ENSMUST00000158198 123 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm18367-201ENSMUST00000176139 600 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm6905-201ENSMUST00000205729 511 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nhlrc3Q8CCH2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms