Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23061-201ENSMUST00000102348 116 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm26013-201ENSMUST00000104404 119 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm15131-201ENSMUST00000119124 595 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm28388-201ENSMUST00000186262 437 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm6677-201ENSMUST00000195100 441 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm42816-201ENSMUST00000198433 325 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trub1Q8C0D0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm11451-201ENSMUST00000118946 630 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm14460-201ENSMUST00000121511 639 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Mir1893-201ENSMUST00000122565 83 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm25226-201ENSMUST00000158198 123 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm37852-201ENSMUST00000193027 350 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm44158-201ENSMUST00000203881 505 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm9102-201ENSMUST00000219250 465 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trub1Q8C0D0 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trub1Q8C0D0 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms