Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm12418-201ENSMUST00000118116 942 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm20493-201ENSMUST00000173706 213 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm6291-201ENSMUST00000179994 309 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm18555-201ENSMUST00000197935 584 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Usp40Q8BWR4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm13857-201ENSMUST00000139645 173 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm22876-201ENSMUST00000175450 298 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm43610-201ENSMUST00000199117 365 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm7238-201ENSMUST00000206467 973 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 AC152169.1-201ENSMUST00000223901 701 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Usp40Q8BWR4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm13688-201ENSMUST00000121557 608 ntBASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm25604-201ENSMUST00000158359 133 ntBASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm5254-201ENSMUST00000188353 977 ntBASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Gm6331-201ENSMUST00000217890 450 ntBASIC14.96□□□□□ -0.01
Usp40Q8BWR4 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Usp40Q8BWR4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms