Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Gm44236-201ENSMUST00000204492 513 ntBASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Nup98Q6PFD9 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 A1cf-204ENSMUST00000224564 1432 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Gm6755-201ENSMUST00000100598 864 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Gm6740-201ENSMUST00000100617 864 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Gm14650-201ENSMUST00000120400 889 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Gm11736-201ENSMUST00000121468 505 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nup98Q6PFD9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm23604-201ENSMUST00000104311 132 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm11573-201ENSMUST00000119956 394 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm7985-201ENSMUST00000183329 981 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm17936-201ENSMUST00000199413 988 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm5174-201ENSMUST00000171131 1423 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Mir181d-201ENSMUST00000102383 72 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm24943-201ENSMUST00000158329 433 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup98Q6PFD9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup98Q6PFD9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms