Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Platr10-202ENSMUST00000191479 818 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.09□□□□□ -0.47
Ift88Q61371 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm44315-201ENSMUST00000203041 219 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.09□□□□□ -0.47
Ift88Q61371 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.08□□□□□ -0.47
Ift88Q61371 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.08□□□□□ -0.47
Ift88Q61371 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Ift88Q61371 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Gm15264-201ENSMUST00000118050 502 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Gm31941-201ENSMUST00000209689 350 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Gm5451-201ENSMUST00000080545 579 ntBASIC12.08□□□□□ -0.48
Ift88Q61371 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ift88Q61371 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ift88Q61371 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ift88Q61371 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Ift88Q61371 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm23272-201ENSMUST00000104053 129 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm12986-201ENSMUST00000119037 967 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm22144-201ENSMUST00000157402 102 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm4654-201ENSMUST00000183305 982 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.07□□□□□ -0.48
Ift88Q61371 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ift88Q61371 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms