Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28047Q3US59 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm19091-201ENSMUST00000208120 978 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm25580-201ENSMUST00000083409 327 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.44□□□□□ -0.42
Gm28047Q3US59 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28047Q3US59 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm15264-201ENSMUST00000118050 502 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Mir5132-201ENSMUST00000175166 71 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm18753-201ENSMUST00000201000 566 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm31941-201ENSMUST00000209689 350 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.43□□□□□ -0.42
Gm28047Q3US59 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms