Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm14332-201ENSMUST00000121982 899 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm40-201ENSMUST00000122131 660 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm23521-201ENSMUST00000177845 110 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Spg11Q3UHA3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm38063-201ENSMUST00000193990 342 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 AC124400.2-201ENSMUST00000224939 253 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm7001-201ENSMUST00000219384 1465 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Mir291b-201ENSMUST00000104838 79 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm13592-201ENSMUST00000118148 1010 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm5400-201ENSMUST00000118494 943 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Mir5108-201ENSMUST00000175276 85 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm43097-201ENSMUST00000196867 151 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 AC154669.1-201ENSMUST00000224405 482 ntBASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.06□□□□□ -0.8
Spg11Q3UHA3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Snord17-201ENSMUST00000104526 238 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms