Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Mir7035-201ENSMUST00000184713 82 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm43969-201ENSMUST00000204833 535 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm45094-201ENSMUST00000207013 617 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm25580-201ENSMUST00000083409 327 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf1Q07802 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf1Q07802 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.17□□□□□ -0.62
Ebf1Q07802 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Snord23-201ENSMUST00000116828 109 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm11993-201ENSMUST00000121861 820 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm9162-201ENSMUST00000182081 991 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm43547-201ENSMUST00000197729 328 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm43249-201ENSMUST00000200464 458 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 BC080696-201ENSMUST00000202858 1218 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm5178-201ENSMUST00000219380 898 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm14005-208ENSMUST00000223654 681 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.16□□□□□ -0.62
Ebf1Q07802 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ebf1Q07802 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ebf1Q07802 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ebf1Q07802 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ebf1Q07802 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.15□□□□□ -0.62
Ebf1Q07802 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.15□□□□□ -0.62
Ebf1Q07802 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ebf1Q07802 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ebf1Q07802 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ebf1Q07802 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ebf1Q07802 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.15□□□□□ -0.62
Ebf1Q07802 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.15□□□□□ -0.62
Ebf1Q07802 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms