Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm27826-201ENSMUST00000175282 255 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm27833-201ENSMUST00000184285 124 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm38233-201ENSMUST00000194259 807 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm22341-201ENSMUST00000083775 129 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.76□□□□□ -0.21
Smarcc1P97496 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm11473-201ENSMUST00000118980 359 ntBASIC13.75□□□□□ -0.21
Smarcc1P97496 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.75□□□□□ -0.21
Smarcc1P97496 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 AC133517.1-201ENSMUST00000225825 594 ntBASIC13.75□□□□□ -0.21
Smarcc1P97496 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcc1P97496 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcc1P97496 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm14592-201ENSMUST00000117201 560 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm14176-201ENSMUST00000121302 477 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm8170-201ENSMUST00000218581 945 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm7242-201ENSMUST00000221134 705 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm5472-201ENSMUST00000178604 1678 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.74□□□□□ -0.21
Smarcc1P97496 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcc1P97496 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcc1P97496 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm13608-201ENSMUST00000121807 1406 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms