Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm9523-201ENSMUST00000199146 1159 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Cacna1aP97445 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 AU015228-201ENSMUST00000121103 1320 ntBASIC10.18□□□□□ -0.78
Cacna1aP97445 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.18□□□□□ -0.78
Cacna1aP97445 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cacna1aP97445 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm18555-201ENSMUST00000197935 584 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm7242-201ENSMUST00000221134 705 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm4917-201ENSMUST00000121452 650 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm26119-201ENSMUST00000175601 104 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cacna1aP97445 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.17□□□□□ -0.78
Cacna1aP97445 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cacna1aP97445 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Snord17-201ENSMUST00000104526 238 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cacna1aP97445 Mir8091-201ENSMUST00000183602 139 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm29548-201ENSMUST00000187012 694 ntBASIC10.16□□□□□ -0.78
Cacna1aP97445 Gm28105-201ENSMUST00000187788 694 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms