Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CiitaP79621 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.88□□□□□ -0.51
CiitaP79621 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CiitaP79621 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.88□□□□□ -0.51
CiitaP79621 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.88□□□□□ -0.51
CiitaP79621 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.88□□□□□ -0.51
CiitaP79621 Gm5244-201ENSMUST00000164001 339 ntBASIC11.88□□□□□ -0.51
CiitaP79621 Gm26272-201ENSMUST00000179241 132 ntBASIC11.88□□□□□ -0.51
CiitaP79621 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 Gm43097-201ENSMUST00000196867 151 ntBASIC11.88□□□□□ -0.51
CiitaP79621 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 Gm44605-201ENSMUST00000206892 949 ntBASIC11.88□□□□□ -0.51
CiitaP79621 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.88□□□□□ -0.51
CiitaP79621 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.88□□□□□ -0.51
CiitaP79621 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CiitaP79621 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
CiitaP79621 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CiitaP79621 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Gm11619-201ENSMUST00000117474 237 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Gm11578-201ENSMUST00000118530 459 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.87□□□□□ -0.51
CiitaP79621 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.87□□□□□ -0.51
CiitaP79621 Gm43969-201ENSMUST00000204833 535 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CiitaP79621 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
CiitaP79621 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CiitaP79621 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.87□□□□□ -0.51
CiitaP79621 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms