Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 AC122860.2-201ENSMUST00000217967 2671 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Gm45165-201ENSMUST00000207763 1631 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Lmo4P61969 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Lmo4P61969 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Lmo4P61969 Mir1249-201ENSMUST00000116791 98 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC8.85□□□□□ -0.99
Lmo4P61969 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC8.85□□□□□ -0.99
Lmo4P61969 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm37197-201ENSMUST00000195607 401 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC8.85□□□□□ -0.99
Lmo4P61969 Trav11n-201ENSMUST00000200113 343 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Gm42588-201ENSMUST00000200538 1297 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC8.85□□□□□ -0.99
Lmo4P61969 AC121567.1-201ENSMUST00000227213 842 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 AC169511.1-201ENSMUST00000227639 995 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Lmo4P61969 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC8.85□□□□□ -0.99
Lmo4P61969 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC8.85□□□□□ -0.99
Lmo4P61969 Gm5159-201ENSMUST00000212733 1652 ntBASIC8.85□□□□□ -0.99
Lmo4P61969 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Lmo4P61969 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC8.84□□□□□ -0.99
Lmo4P61969 Gm42833-201ENSMUST00000196019 2124 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Lmo4P61969 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Gm13204-201ENSMUST00000120110 821 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC8.84□□□□□ -0.99
Lmo4P61969 Mir8111-201ENSMUST00000184463 137 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Gm37860-201ENSMUST00000195380 1034 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Rps3a2-201ENSMUST00000074245 792 ntBASIC8.84□□□□□ -0.99
Lmo4P61969 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Lmo4P61969 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Lmo4P61969 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Lmo4P61969 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Lmo4P61969 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms