Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Mir877-201ENSMUST00000104738 85 ntBASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gm14028-201ENSMUST00000117434 479 ntBASIC10.45□□□□□ -0.74
Cdkn2bP55271 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gm45398-201ENSMUST00000210561 165 ntBASIC10.45□□□□□ -0.74
Cdkn2bP55271 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.45□□□□□ -0.74
Cdkn2bP55271 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdkn2bP55271 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm22144-201ENSMUST00000157402 102 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Snord55-201ENSMUST00000174939 79 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm4654-201ENSMUST00000183305 982 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm27341-201ENSMUST00000183570 106 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm40414-201ENSMUST00000197608 481 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.44□□□□□ -0.74
Cdkn2bP55271 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdkn2bP55271 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdkn2bP55271 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdkn2bP55271 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdkn2bP55271 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms