Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mir1901-201ENSMUST00000122616 78 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.82□□□□□ -0.68
Pdx1P52946 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm7255-201ENSMUST00000187371 908 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm28746-201ENSMUST00000187453 380 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm18042-201ENSMUST00000219887 790 ntBASIC10.82□□□□□ -0.68
Pdx1P52946 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pdx1P52946 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.82□□□□□ -0.68
Pdx1P52946 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdx1P52946 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Pdx1P52946 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm25063-201ENSMUST00000104666 94 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm14497-201ENSMUST00000119537 580 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.81□□□□□ -0.68
Pdx1P52946 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm9081-201ENSMUST00000182346 991 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdx1P52946 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm42518-201ENSMUST00000196277 938 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Gm43671-201ENSMUST00000200422 433 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Gm3726-201ENSMUST00000203110 785 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.81□□□□□ -0.68
Pdx1P52946 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.81□□□□□ -0.68
Pdx1P52946 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdx1P52946 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdx1P52946 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdx1P52946 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms