Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm6158-201ENSMUST00000109467 904 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shmt1P50431 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm26989-201ENSMUST00000182608 749 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shmt1P50431 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shmt1P50431 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shmt1P50431 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shmt1P50431 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.57□□□□□ -0.56
Shmt1P50431 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm24791-201ENSMUST00000104284 131 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.56□□□□□ -0.56
Shmt1P50431 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm14213-201ENSMUST00000119778 768 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.56□□□□□ -0.56
Shmt1P50431 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm18014-201ENSMUST00000183369 817 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.56□□□□□ -0.56
Shmt1P50431 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Gm7255-201ENSMUST00000187371 908 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm6423-201ENSMUST00000204315 934 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Gm18035-201ENSMUST00000211962 589 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.56□□□□□ -0.56
Shmt1P50431 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.56□□□□□ -0.56
Shmt1P50431 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shmt1P50431 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shmt1P50431 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Shmt1P50431 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shmt1P50431 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shmt1P50431 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms